PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KHN39737.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
Family bHLH
Protein Properties Length: 190aa    MW: 21247 Da    PI: 10.5425
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KHN39737.1genomeTCUHKView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH43.74.9e-144590555
                HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
         HLH  5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55
                hn  E+rRR+ri++++  L+ l+P++      K +Ka +L +A+eY+k+Lq
  KHN39737.1 45 HNLYEKRRRSRIKEKMKALQNLIPNS-----NKTNKALMLDEAIEYLKQLQ 90
                9************************7.....5******************9 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474591.7E-1737101IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000831.37E-123894No hitNo description
Gene3DG3DSA:4.10.280.101.1E-173896IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088816.0054089IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000102.7E-114590IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003531.9E-134695IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 190 aa     Download sequence    Send to blast
MASTIKENPN FVNPQLLFPL LYSSQQIPIP PLCSSSKRSR AVEFHNLYEK RRRSRIKEKM  60
KALQNLIPNS NKTNKALMLD EAIEYLKQLQ LQEQRNVKFL LRTNDVVALT MEEDPCKGSQ  120
RKCCKVYCSG GSSSTSPTIV ILHAVFVPPV SVVFFLRVGS PCSATAPPLV LSSPGKLRVV  180
FSLRASALLR
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankBT1477272e-55BT147727.1 Lotus japonicus clone JCVI-FLLj-8F4 unknown mRNA.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_014624907.13e-58PREDICTED: transcription factor NAI1-like isoform X1
TrEMBLA0A0B2S6591e-136A0A0B2S659_GLYSO; Transcription factor SPATULA
STRINGGLYMA17G21573.18e-58(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF3649722
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G67110.11e-24bHLH family protein
Publications ? help Back to Top
  1. Qi X, et al.
    Identification of a novel salt tolerance gene in wild soybean by whole-genome sequencing.
    Nat Commun, 2014. 5: p. 4340
    [PMID:25004933]